I have to create a fairly large double array 12000ish x 55000ish. Unfortunately, I get an out of memory exception. I used to develop in Java and could change the memory settings. Is this possible with C# or is it just impossible? I am using VS 2008.
4 Answers
Each double is 8 bytes, so you're trying to allocate a single array with just over 5GB. The CLR has a per-object limit of around 2GB IIRC, even for a 64-bit CLR. In other words, it's not the total amount of memory available that's the problem (although obviously you'll have issues if you don't have enough memory), but the per-object size.
I suggest you split it into smaller arrays, perhaps behind a facade of some description. I don't believe there's any way to workaround that limit for a single array.
EDIT: You could go for an array of arrays - aka a jagged array:
double[][] array = new double[12000][];
for (int i = 0; i < array.Length; i++)
{
array[i] = new double[55000];
}
Would that be acceptable to you?
(You can't use a rectangular array (double[,]) as that would have the same per-object size problem.)
10 Comments
bitxwise
Instead of a single array of doubles, I think he means 2D array
Ray Booysen
Virtual Memory is not the issue. You're trying to allocate 5GB of memory with a 2GB limit. :)
vgru
Also, due to memory fragmentation, OP might experience problems as soon as they try to allocate a contiguous block of several hundreds of Mb.
Servy
@csetzkorn If the data is very sparse then perhaps they shouldn't be in an array at all. Use a
Dictionary<int, double> to store the data. It's probably going to use less space so long as about half of the values are empty.
Jon Skeet
@Servy: Given the acceptance, I suspect the OP was actually fine with the fact that the jagged array used quite a lot of memory. These days 5GB isn't that much :)
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Since you can't create objects larger than 2GB you can try to use MemoryMappedFile to work with chunk of memory of the required size.
var data = MemoryMappedFile.CreateNew("big data", 12000L * 55000L);
var view = data.CreateViewAccessor();
var rnd = new Random();
for (var i = 0L; i < 12000L; ++i)
{
for (var j = 0L; j < 55000L; ++j)
{
var input = rnd.NextDouble();
view.Write<double>(i * 55000L + j, ref input);
}
}
Comments
Providing that your total memory is sufficient, you can prevent Out of memory exceptions resulting from LOH fragmentation by creating a bunch of smaller arrays, and wrapping them in a single IList<T>, or some other indexed interface.
Here is a link which describes it:
BigArray<T>, getting around the 2GB array size limit
Credits: this post (C# chunked array).
Comments
Well either you are out of memory (close some programs) or you're hitting the memory allocation limit (about 2Gb), this memory needs to be a contiguous block. You could use a 64bit machine in which case you'll have more memory available or I think you can make the application large address aware (googling will tell you how to do this if it's possible in this case).
Believe you add a /3GB switch to the Boot.ini file for the large address awareness.
LARGE_ADDRESS_AWARE-PE-Flag