I have the following script
#!/bin/bash
/usr/bin/osascript << EOT
set myfile to choose file
EOT
no_ext=$(python -c "print '$myfile'.split('.')[0]")
### this works - just need to know how to pass the arg
R CMD Sweave no_ext.Rnw
pdflatex no_ext.tex
open no_ext.pdf
Can anyone point me to "how to pass the variable myfile correctly" ?
EDIT Thx for all the suggestions!
Don't know what to accept, all of your answers really helped me since I learned a lot from everybody.
The following problems exist in your script:
A variable set in the AppleScript section does become defined in the enclosing shell script. You have to do the data exchange with the shell script by using command substitution.
AppleScripts invoked from a shell script aren't allowed to do user interaction because they do not have an application context. You can use the helper application "AppleScript Runner" to run user interaction commands.
Here is a revised version of your script where those problems are fixed:
#!/bin/bash
myfile=$(/usr/bin/osascript << EOT
tell app "AppleScript Runner"
activate
return posix path of (choose file)
end
EOT)
if [ $? -eq 0 ]
then
echo $myfile
else
echo "User canceled"
fi
First, you need to get the contents of the myfile variable from Applescript to bash. I don't know Applescript, so I'll make a shot in the dark as to how to write to its standard output. Then the python part is just unnecessary complexity (and likely wrong anyway, you were throwing away everything after the first . rather than the last). Next you need a $ before the variable name in bash syntax. I think the following script does what you want:
#!/bin/sh
set -e
myfile=$(osascript <<EOT
set myfile to choose file
write myfile to stdout
EOT
)
no_ext="${myfile%.*}"
R CMD Sweave "$no_ext.Rnw"
pdflatex "$no_ext.tex"
open "$no_ext.pdf"
(set -e at the beginning makes the shell exit immediately if an error occurs, instead of trying to execute pdflatex even though no .tex file has been produced or somesuch.)
oascript, but the Applescript bit may be wrong since I don't know Applescript. What do you see if you replace set -e by set -ex (this causes the shell to print an execution trace)?Realize that applescript paths are colon ":" delimited. You need slash delimited in bash so in applescript terms that's the "posix path". Also, when using osascript it can't open dialog windows. You must tell an application to open the window. Next, you "return" something from the applescript... that's what goes to bash. Finally, in bash to execute a command and assign the result to a variable use `` around the command. So knowing this here's a shell script to use an applescript to get the myFile variable.
#!/bin/bash
myFile=`/usr/bin/osascript << EOT
tell application "Finder"
activate
set myfile to choose file with prompt "Select the file to use in bash!"
end tell
return (posix path of myfile)
EOT`
echo $myFile
